Syllabus
Course: CH 220.2   Methods in Chemical Research

Semester: Fall, 2009

Professor:
Carl Salter
Collier 228     Phone:   625-7920         email: csalter at chem .moravian .edu

Catalog Description: An introduction to the use of the computer in chemical experimentation and research, including the production of research-quality manuscripts that include scientific tables, figures, and chemical drawings.  The use statistical programs and experimental design will be covered. Real-time data acquisition hardware and software will be used by the students to gather data for analysis in spreadsheets. Students will be introduced to on-line searches of the chemical literature using Chemical Abstracts and the Science Citation Index. Fall. One 100 minute period each week. One-half unit credit. 

Required Text:  Beall & Trimbur, A Short Guide to Reading and Writing About Chemistry, 2nd Ed, Longman, 2001. ISBN 0-321-07844-6.

Optional Texts: D. C. Harris, Quantitative Chemical Analysis, 6th Ed, Freeman, 1999.
You will read and outline chapters 3, 4, and 5 from Quantitative Chemical Analysis; chapters 4 and 5 illiustrate the use of EXCEL spreadsheets to analyze chemical data.
Any manual on EXCEL will be helpful. A Guide to Microsoft Excel for Scientists and Engineers 2nd Ed by B. V. Liengme is available in the Computational Chemistry Lab, CHS 227.  

Goal:
 
This is the writing-intensive course for the chemistry major.  You will learn how to write about science and science experiments in a variety of formats.  The production of well-written chemical manuscripts with charts, tables, and chemical drawings is a high priority of this class.  Your grade in this course is determined by the documents that you submit; these documents will be evaluated on writing and presentation of data.  The course will also familiarize you with computer techniques that you will need to perform research projects and carry out other functions of a professional chemist. These techniques include searching the literature on a chemical problem, designing statistically sound experiments to answer chemical questions, organizing and analyzing data using spreadsheets, and preparing professional documents that explain your work to other chemists. 
Four lab reports                                                              40%
Writing journal                                                                 20%
Clipboard assignment                                                         5%  
Outline and Reaction paper to Asimov essay                    15%
"Forensics" letter                                                                5%
Three  “Dear Aunt Gladys” letters                                    15%
There is no Final Exam for this half-unit course.

It is within the instructor’s purview to apply qualitative judgment in determining grades for an assignment or for the course.
Students who wish to request accommodations in this class for a disability should contact Mr. Joe Kempfer, Assistant Director of Learning Services for Disability Support, 1307 Main Street (extension 1510). Accommodations cannot be provided until authorization is received from the office of Learning Services.

The Writing Journal: A bound notebook of the type used for laboratories can be used to submit your writing assignments from the Beall & Trimbur textbook, A Short Guide to Reading and Writing about Chemistry.  The assignments from the textbook should be completed in the notebook--you may write them by hand, but I must be able to read them!
Divide your bound notebook in two main parts.  Use the first two-thirds for your writing journal; use the last third as a lab notebook.  Your notebook should contain information on all the formal experiments that we do in lab:  Copper sulfate, pH titration, M&Ms, titrations, and the kinetics experiment.  Your notebook should include spreadsheet analysis of the data pasted into the book.

Here are the Assignments from the Short Guide to Writing:

Chapter 1: The Basics  Page 12, Exercises 1, 2, 3.
Prior to the copper sulfate experiment:
Prepare a list of at least six web references on Spectronic 20s that describe how to use them.  Summarize the instructions each reference gives, then combine the instructions to produce your own set of instructions for the Spec 20. 
Summarize the research of a chemistry professor at a Big Ten or Ivy League university based on web references.

Chapter 2: Scientific Responsibility  Page 32, writing assignment 1

Chapter 3: Reading and Writing to Learn Chemistry
Page 36 Exercise 1: list models of acid-base chemistry you find in a general chemistry textbook
Page 45 Exercise 2: use a topic from chapter 4 or 5 of the quant book by Harris.
Page 49 Exercise 3: use chapter 3 of Harris's quant book.
Page 57 Exercise 2
In addition, compare the discussion of acid-base chemistry in a general textbook with that in your Harris's quant book.
Outline Chapters 3, 4, and 5 from Harris's quant book.  As you do, answer Harris’s essay problems: Chapter 4-1,2, 8, 9, 10, 13, 17; Chapter 5-5, 6.

Chapter 4:
Writing Lab Reports Page 61, writing assignment 1.

Chapter 5:
  How to Read a Scientific Article: Writing Summaries and Critiques
What is the difference between a summary and a critique?
Summarize a research paper written by a member of Moravian's chemistry or biology departments. 
You must ask a faculty member to recommend a paper to you, and they should send me an email confirming which paper they gave you.

Critique The Pleasures of Merely Measuring by Harold McGee, from chapter 11 of The Curious Cook.
Summarize the excerpt from Zen and the Art of Motorcycle Maintenance by Robert Persig.

Chapter 6:
Writing Literature Reviews
 For the research paper you summarized in Chapter 5, search for more recent related articles using both Chemical Abstracts and Science Citation Index.  List roughly a half dozen and summarize their abstracts.

Reaction paper to Asimov essay: You will receive a copy of an essay by Isaac Asimov, famous science fiction writer, written late in his life, called The Relativity of Wrong.  Your assignment is to write a three-to-five page (double-spaced) response to Asimov’s essay, explaining his thesis and stating whether or not you agree with it.  To assist your analysis of Asimov's paper, you will submit a Toulmin analysis of his argument.  The classroom discussion of Asimov's paper will also be based on your Toulmin analysis.
    To develop your paper further, consider these points: Asimov cites several examples of scientific theories to support his thesis; if you agree with Asimov, tell me which examples best illustrate his thesis; on the other hand, if you disagree with Asimov, pick one historical example and tell me why you find it unconvincing.   In addition, you must read Lessons Learned from Lord Rayleigh ..., JCE 1990, 67, 925, and discuss the history of the scientific theory presented in this article--does it support or contradicts Asimov’s thesis and why?  Finally, tell me if Asimov’s assay has in any way changed your view of scientific research.

“Aunt Gladys Letters”: Your Aunt Gladys is curious; she knows you’re studying chemistry, and she would like you to explain how some amazing thing that she’s heard of really works.  Your task is to find the answer to her question on the Internet, in the library, or in the laboratory, and then write a letter back to her that she can understand.  In addition, you’ll be writing to her about soda and lemon juice, so take good notes!